Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Gm12928-201ENSMUST00000117115 573 ntBASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Gm2423-201ENSMUST00000074863 733 ntBASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc194A0A140LIT1 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Gm5866-201ENSMUST00000177881 973 ntBASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc194A0A140LIT1 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms