Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm15393-201ENSMUST00000120499 219 ntBASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm29541-201ENSMUST00000191351 678 ntBASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm2128-201ENSMUST00000108009 2560 ntBASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm42943-201ENSMUST00000199676 3242 ntBASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm12585-201ENSMUST00000117307 290 ntBASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm11557-201ENSMUST00000120200 1008 ntBASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm13385-201ENSMUST00000121089 220 ntBASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm25144-201ENSMUST00000179561 110 ntBASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm25352-201ENSMUST00000179815 110 ntBASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm8927-201ENSMUST00000181978 981 ntBASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 AC133598.3-202ENSMUST00000224219 531 ntBASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm3222-201ENSMUST00000071282 990 ntBASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 AC168058.1-201ENSMUST00000219521 2282 ntBASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms