Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Gm37497-201ENSMUST00000195830 798 ntBASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn9Q9Z0S7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Gm12203-201ENSMUST00000118235 598 ntBASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Gm13369-201ENSMUST00000119442 987 ntBASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Gm12209-201ENSMUST00000120089 596 ntBASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Gm12490-201ENSMUST00000120255 560 ntBASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Gm11637-201ENSMUST00000120601 592 ntBASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Gm24196-201ENSMUST00000179161 110 ntBASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Gm8652-201ENSMUST00000181363 964 ntBASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn9Q9Z0S7 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Gm16479-201ENSMUST00000121706 932 ntBASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Gm26185-201ENSMUST00000157692 266 ntBASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Gm27486-201ENSMUST00000184923 80 ntBASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms