Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn13Q9Z0S4 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn13Q9Z0S4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn13Q9Z0S4 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn13Q9Z0S4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn13Q9Z0S4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn13Q9Z0S4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cldn13Q9Z0S4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Mir1982-201ENSMUST00000157368 74 ntBASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Gm27331-201ENSMUST00000183705 60 ntBASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cldn13Q9Z0S4 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Gm16372-201ENSMUST00000073088 450 ntBASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn13Q9Z0S4 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn13Q9Z0S4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Cldn13Q9Z0S4 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn13Q9Z0S4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn13Q9Z0S4 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms