Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm26464-201ENSMUST00000157094 305 ntBASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm27397-201ENSMUST00000184997 107 ntBASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm43094-201ENSMUST00000196549 921 ntBASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Chchd1-203ENSMUST00000224633 557 ntBASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cx3cr1Q9Z0D9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Daam2-202ENSMUST00000224595 1926 ntBASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm11524-201ENSMUST00000119349 807 ntBASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm27618-201ENSMUST00000183671 60 ntBASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm37277-201ENSMUST00000194052 1111 ntBASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms