Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh17Q9R100 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Cdh17Q9R100 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cdh17Q9R100 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh17Q9R100 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cdh17Q9R100 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh17Q9R100 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh17Q9R100 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh17Q9R100 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdh17Q9R100 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Cdh17Q9R100 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Gm14704-201ENSMUST00000120300 874 ntBASIC12.5□□□□□ -0.41
Cdh17Q9R100 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Proscos-202ENSMUST00000178990 666 ntBASIC12.5□□□□□ -0.41
Cdh17Q9R100 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Gm28911-201ENSMUST00000188837 117 ntBASIC12.5□□□□□ -0.41
Cdh17Q9R100 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdh17Q9R100 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.5□□□□□ -0.41
Cdh17Q9R100 Gm38671-201ENSMUST00000200573 130 ntBASIC12.5□□□□□ -0.41
Cdh17Q9R100 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.5□□□□□ -0.41
Cdh17Q9R100 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Cdh17Q9R100 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdh17Q9R100 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.49□□□□□ -0.41
Cdh17Q9R100 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.49□□□□□ -0.41
Cdh17Q9R100 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Gm14921-201ENSMUST00000118643 908 ntBASIC12.49□□□□□ -0.41
Cdh17Q9R100 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Gm5866-201ENSMUST00000177881 973 ntBASIC12.49□□□□□ -0.41
Cdh17Q9R100 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdh17Q9R100 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.49□□□□□ -0.41
Cdh17Q9R100 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms