Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
AmfrQ9R049 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
AmfrQ9R049 Gm4984-201ENSMUST00000115987 360 ntBASIC14.39□□□□□ -0.11
AmfrQ9R049 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Gm6447-201ENSMUST00000118905 835 ntBASIC14.39□□□□□ -0.11
AmfrQ9R049 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.39□□□□□ -0.11
AmfrQ9R049 Mir1982-201ENSMUST00000157368 74 ntBASIC14.39□□□□□ -0.11
AmfrQ9R049 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.39□□□□□ -0.11
AmfrQ9R049 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.39□□□□□ -0.11
AmfrQ9R049 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.39□□□□□ -0.11
AmfrQ9R049 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.39□□□□□ -0.11
AmfrQ9R049 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.39□□□□□ -0.11
AmfrQ9R049 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.39□□□□□ -0.11
AmfrQ9R049 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.39□□□□□ -0.11
AmfrQ9R049 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.39□□□□□ -0.11
AmfrQ9R049 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
AmfrQ9R049 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.39□□□□□ -0.11
AmfrQ9R049 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
AmfrQ9R049 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.39□□□□□ -0.11
AmfrQ9R049 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AmfrQ9R049 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.39□□□□□ -0.11
AmfrQ9R049 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.39□□□□□ -0.11
AmfrQ9R049 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.38□□□□□ -0.11
AmfrQ9R049 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
AmfrQ9R049 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
AmfrQ9R049 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
AmfrQ9R049 Gm14350-201ENSMUST00000116642 640 ntBASIC14.38□□□□□ -0.11
AmfrQ9R049 Gm13226-201ENSMUST00000117838 404 ntBASIC14.38□□□□□ -0.11
AmfrQ9R049 Gm16177-201ENSMUST00000120728 718 ntBASIC14.38□□□□□ -0.11
AmfrQ9R049 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
AmfrQ9R049 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Gm27331-201ENSMUST00000183705 60 ntBASIC14.38□□□□□ -0.11
AmfrQ9R049 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.38□□□□□ -0.11
AmfrQ9R049 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.38□□□□□ -0.11
AmfrQ9R049 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
AmfrQ9R049 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.38□□□□□ -0.11
AmfrQ9R049 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.38□□□□□ -0.11
AmfrQ9R049 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.38□□□□□ -0.11
AmfrQ9R049 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
AmfrQ9R049 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AmfrQ9R049 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
AmfrQ9R049 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AmfrQ9R049 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AmfrQ9R049 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
AmfrQ9R049 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
AmfrQ9R049 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AmfrQ9R049 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AmfrQ9R049 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.37□□□□□ -0.11
AmfrQ9R049 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AmfrQ9R049 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AmfrQ9R049 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
AmfrQ9R049 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
AmfrQ9R049 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AmfrQ9R049 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
AmfrQ9R049 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AmfrQ9R049 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.37□□□□□ -0.11
AmfrQ9R049 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AmfrQ9R049 Gm11425-201ENSMUST00000119608 498 ntBASIC14.37□□□□□ -0.11
AmfrQ9R049 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.37□□□□□ -0.11
AmfrQ9R049 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AmfrQ9R049 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.37□□□□□ -0.11
AmfrQ9R049 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AmfrQ9R049 Gm9396-201ENSMUST00000076703 567 ntBASIC14.37□□□□□ -0.11
AmfrQ9R049 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.37□□□□□ -0.11
AmfrQ9R049 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AmfrQ9R049 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
AmfrQ9R049 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AmfrQ9R049 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AmfrQ9R049 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms