Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gm42693-201ENSMUST00000196779 631 ntBASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Gm10268-201ENSMUST00000085340 555 ntBASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clcf1Q9QZM3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clcf1Q9QZM3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Gm2231-201ENSMUST00000125661 612 ntBASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms