Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Ccl28Q9JIL2 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl28Q9JIL2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl28Q9JIL2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl28Q9JIL2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl28Q9JIL2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Gm14350-201ENSMUST00000116642 640 ntBASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Gm5866-201ENSMUST00000177881 973 ntBASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Mir6392-201ENSMUST00000184924 108 ntBASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl28Q9JIL2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Gm16202-201ENSMUST00000117532 544 ntBASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Gm15429-201ENSMUST00000151268 798 ntBASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Gm6458-201ENSMUST00000211573 635 ntBASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Gm18624-201ENSMUST00000220966 658 ntBASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl28Q9JIL2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl28Q9JIL2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Ccl28Q9JIL2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl28Q9JIL2 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Ccl28Q9JIL2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Ccl28Q9JIL2 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl28Q9JIL2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl28Q9JIL2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl28Q9JIL2 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl28Q9JIL2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl28Q9JIL2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl28Q9JIL2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Ccl28Q9JIL2 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl28Q9JIL2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms