Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Gm5312-201ENSMUST00000203728 547 ntBASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Gm45841-201ENSMUST00000207700 164 ntBASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube4bQ9ES00 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ube4bQ9ES00 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ube4bQ9ES00 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.33□□□□□ -0.43
Ube4bQ9ES00 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ube4bQ9ES00 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube4bQ9ES00 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ube4bQ9ES00 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.32□□□□□ -0.44
Ube4bQ9ES00 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.32□□□□□ -0.44
Ube4bQ9ES00 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube4bQ9ES00 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube4bQ9ES00 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube4bQ9ES00 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube4bQ9ES00 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube4bQ9ES00 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.32□□□□□ -0.44
Ube4bQ9ES00 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube4bQ9ES00 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.32□□□□□ -0.44
Ube4bQ9ES00 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms