Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Gm11745-201ENSMUST00000121669 448 ntBASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Gm21362-201ENSMUST00000194272 928 ntBASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Gm9229-201ENSMUST00000222777 126 ntBASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ssr3Q9DCF9 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ssr3Q9DCF9 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ssr3Q9DCF9 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ssr3Q9DCF9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Ssr3Q9DCF9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ssr3Q9DCF9 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Ssr3Q9DCF9 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ssr3Q9DCF9 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ssr3Q9DCF9 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ssr3Q9DCF9 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ssr3Q9DCF9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
Ssr3Q9DCF9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ssr3Q9DCF9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ssr3Q9DCF9 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ssr3Q9DCF9 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ssr3Q9DCF9 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ssr3Q9DCF9 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ssr3Q9DCF9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ssr3Q9DCF9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ssr3Q9DCF9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ssr3Q9DCF9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ssr3Q9DCF9 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.44□□□□□ -0.58
Ssr3Q9DCF9 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ssr3Q9DCF9 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ssr3Q9DCF9 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ssr3Q9DCF9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ssr3Q9DCF9 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ssr3Q9DCF9 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms