Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Gm4271-201ENSMUST00000174444 973 ntBASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Gm43179-201ENSMUST00000198797 275 ntBASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Gm7399-201ENSMUST00000032395 858 ntBASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Gm6013-201ENSMUST00000212264 699 ntBASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdc40Q9DC48 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdc40Q9DC48 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.96□□□□□ -0.5
Cdc40Q9DC48 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdc40Q9DC48 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.96□□□□□ -0.5
Cdc40Q9DC48 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.96□□□□□ -0.5
Cdc40Q9DC48 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.5
Cdc40Q9DC48 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdc40Q9DC48 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdc40Q9DC48 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdc40Q9DC48 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.96□□□□□ -0.5
Cdc40Q9DC48 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdc40Q9DC48 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cdc40Q9DC48 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdc40Q9DC48 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Gm37922-201ENSMUST00000195596 455 ntBASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Gm19184-201ENSMUST00000196798 928 ntBASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Gm9823-201ENSMUST00000051212 327 ntBASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms