Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Gm24644-201ENSMUST00000157114 139 ntBASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Mir339-201ENSMUST00000083659 96 ntBASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC16.19■□□□□ 0.18
Chmp4bQ9D8B3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Gm23363-201ENSMUST00000175024 79 ntBASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Gm22121-201ENSMUST00000175148 54 ntBASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Gm29649-201ENSMUST00000185649 419 ntBASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Gm4768-201ENSMUST00000206199 686 ntBASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp4bQ9D8B3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Gm13369-201ENSMUST00000119442 987 ntBASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Gm4271-201ENSMUST00000174444 973 ntBASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Gm29705-201ENSMUST00000212598 474 ntBASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Gm14608-201ENSMUST00000120030 1553 ntBASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Gm42863-201ENSMUST00000197875 2958 ntBASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp4bQ9D8B3 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms