Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC16.89■□□□□ 0.29
U2af1Q9D883 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC16.89■□□□□ 0.29
U2af1Q9D883 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
U2af1Q9D883 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
U2af1Q9D883 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Mir1247-201ENSMUST00000116706 82 ntBASIC16.88■□□□□ 0.29
U2af1Q9D883 Gm15370-201ENSMUST00000117158 253 ntBASIC16.88■□□□□ 0.29
U2af1Q9D883 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC16.88■□□□□ 0.29
U2af1Q9D883 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC16.88■□□□□ 0.29
U2af1Q9D883 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.88■□□□□ 0.29
U2af1Q9D883 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC16.88■□□□□ 0.29
U2af1Q9D883 Gm8227-201ENSMUST00000223306 571 ntBASIC16.88■□□□□ 0.29
U2af1Q9D883 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.88■□□□□ 0.29
U2af1Q9D883 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Gm17383-201ENSMUST00000078739 1041 ntBASIC16.88■□□□□ 0.29
U2af1Q9D883 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
U2af1Q9D883 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC16.88■□□□□ 0.29
U2af1Q9D883 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
U2af1Q9D883 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
U2af1Q9D883 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
U2af1Q9D883 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
U2af1Q9D883 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
U2af1Q9D883 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
U2af1Q9D883 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
U2af1Q9D883 Gm37827-201ENSMUST00000194486 1542 ntBASIC16.87■□□□□ 0.29
U2af1Q9D883 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
U2af1Q9D883 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
U2af1Q9D883 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
U2af1Q9D883 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
U2af1Q9D883 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.87■□□□□ 0.29
U2af1Q9D883 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
U2af1Q9D883 Gm6334-201ENSMUST00000207083 228 ntBASIC16.87■□□□□ 0.29
U2af1Q9D883 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
U2af1Q9D883 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.87■□□□□ 0.29
U2af1Q9D883 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
U2af1Q9D883 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
U2af1Q9D883 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
U2af1Q9D883 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
U2af1Q9D883 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
U2af1Q9D883 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
U2af1Q9D883 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
U2af1Q9D883 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
U2af1Q9D883 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
U2af1Q9D883 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
U2af1Q9D883 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
U2af1Q9D883 Daam2-202ENSMUST00000224595 1926 ntBASIC16.86■□□□□ 0.29
U2af1Q9D883 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
U2af1Q9D883 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
U2af1Q9D883 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
U2af1Q9D883 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC16.86■□□□□ 0.29
U2af1Q9D883 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC16.86■□□□□ 0.29
U2af1Q9D883 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
U2af1Q9D883 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
U2af1Q9D883 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC16.86■□□□□ 0.29
U2af1Q9D883 Gm7046-201ENSMUST00000221351 977 ntBASIC16.86■□□□□ 0.29
U2af1Q9D883 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
U2af1Q9D883 Gm24526-201ENSMUST00000082921 158 ntBASIC16.86■□□□□ 0.29
U2af1Q9D883 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
U2af1Q9D883 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
U2af1Q9D883 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
U2af1Q9D883 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC16.86■□□□□ 0.29
U2af1Q9D883 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
U2af1Q9D883 Gm8617-201ENSMUST00000118796 2222 ntBASIC16.86■□□□□ 0.29
U2af1Q9D883 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
U2af1Q9D883 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
U2af1Q9D883 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
U2af1Q9D883 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
U2af1Q9D883 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
U2af1Q9D883 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
U2af1Q9D883 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
U2af1Q9D883 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
U2af1Q9D883 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
U2af1Q9D883 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2af1Q9D883 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2af1Q9D883 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2af1Q9D883 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2af1Q9D883 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms