Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp5Q9D7S9 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Chmp5Q9D7S9 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp5Q9D7S9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp5Q9D7S9 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp5Q9D7S9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC16.05■□□□□ 0.16
Chmp5Q9D7S9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp5Q9D7S9 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp5Q9D7S9 Gm43721-201ENSMUST00000199677 2313 ntBASIC16.05■□□□□ 0.16
Chmp5Q9D7S9 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC16.05■□□□□ 0.16
Chmp5Q9D7S9 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Gm14350-201ENSMUST00000116642 640 ntBASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Gm13813-201ENSMUST00000120998 787 ntBASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Gm44124-201ENSMUST00000204159 472 ntBASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC16.04■□□□□ 0.16
Chmp5Q9D7S9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Gm15371-201ENSMUST00000117057 784 ntBASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Gm42612-201ENSMUST00000197986 623 ntBASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Gm43170-201ENSMUST00000199827 612 ntBASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp5Q9D7S9 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp5Q9D7S9 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Chmp5Q9D7S9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Chmp5Q9D7S9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.02■□□□□ 0.16
Chmp5Q9D7S9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
Chmp5Q9D7S9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp5Q9D7S9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp5Q9D7S9 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp5Q9D7S9 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp5Q9D7S9 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp5Q9D7S9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.02■□□□□ 0.16
Chmp5Q9D7S9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Chmp5Q9D7S9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.02■□□□□ 0.16
Chmp5Q9D7S9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp5Q9D7S9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.02■□□□□ 0.16
Chmp5Q9D7S9 AC169036.1-201ENSMUST00000227994 296 ntBASIC16.02■□□□□ 0.16
Chmp5Q9D7S9 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp5Q9D7S9 Gm43051-201ENSMUST00000201096 2678 ntBASIC16.02■□□□□ 0.16
Chmp5Q9D7S9 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chmp5Q9D7S9 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chmp5Q9D7S9 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chmp5Q9D7S9 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chmp5Q9D7S9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Chmp5Q9D7S9 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Chmp5Q9D7S9 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chmp5Q9D7S9 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Chmp5Q9D7S9 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chmp5Q9D7S9 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms