Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp4cQ9D7F7 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp4cQ9D7F7 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp4cQ9D7F7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp4cQ9D7F7 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Chmp4cQ9D7F7 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.36■□□□□ 0.05
Chmp4cQ9D7F7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp4cQ9D7F7 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp4cQ9D7F7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp4cQ9D7F7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC15.36■□□□□ 0.05
Chmp4cQ9D7F7 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp4cQ9D7F7 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.36■□□□□ 0.05
Chmp4cQ9D7F7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp4cQ9D7F7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp4cQ9D7F7 Gm10728-201ENSMUST00000194292 1829 ntBASIC15.36■□□□□ 0.05
Chmp4cQ9D7F7 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Chmp4cQ9D7F7 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp4cQ9D7F7 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Pck2-205ENSMUST00000226352 2784 ntBASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Gm44397-201ENSMUST00000195950 113 ntBASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC15.35■□□□□ 0.05
Chmp4cQ9D7F7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Gm12091-201ENSMUST00000146791 830 ntBASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Gm2495-201ENSMUST00000191160 466 ntBASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Itm2b-204ENSMUST00000228637 783 ntBASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp4cQ9D7F7 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp4cQ9D7F7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp4cQ9D7F7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Chmp4cQ9D7F7 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Chmp4cQ9D7F7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp4cQ9D7F7 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 Gm15371-201ENSMUST00000117057 784 ntBASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms