Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Gm7293-201ENSMUST00000216682 1007 ntBASIC15.31■□□□□ 0.04
Stag1Q9D3E6 CT030182.1-201ENSMUST00000225935 533 ntBASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Mir339-201ENSMUST00000083659 96 ntBASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC15.31■□□□□ 0.04
Stag1Q9D3E6 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Stag1Q9D3E6 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Gm11930-201ENSMUST00000117788 190 ntBASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Gm14921-201ENSMUST00000118643 908 ntBASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Gm38317-201ENSMUST00000195564 343 ntBASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Gm44405-201ENSMUST00000198952 126 ntBASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.3■□□□□ 0.04
Stag1Q9D3E6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Stag1Q9D3E6 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 AC113441.2-201ENSMUST00000221538 1468 ntBASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Gm5869-201ENSMUST00000200248 1257 ntBASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Gm44967-201ENSMUST00000207047 631 ntBASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Gm5363-201ENSMUST00000211927 938 ntBASIC15.29■□□□□ 0.04
Stag1Q9D3E6 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Gm18041-201ENSMUST00000218210 618 ntBASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Gm45925-201ENSMUST00000218882 744 ntBASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms