Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.91□□□□□ -0.34
Trim42Q9D2H5 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.91□□□□□ -0.34
Trim42Q9D2H5 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim42Q9D2H5 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim42Q9D2H5 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.91□□□□□ -0.34
Trim42Q9D2H5 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.91□□□□□ -0.34
Trim42Q9D2H5 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim42Q9D2H5 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim42Q9D2H5 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim42Q9D2H5 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim42Q9D2H5 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim42Q9D2H5 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trim42Q9D2H5 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Gm8410-201ENSMUST00000117225 605 ntBASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Gm15240-201ENSMUST00000118156 720 ntBASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Gm28630-201ENSMUST00000187806 498 ntBASIC12.89□□□□□ -0.35
Trim42Q9D2H5 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim42Q9D2H5 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms