Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Gm37472-201ENSMUST00000192342 4052 ntBASIC15.1■□□□□ 0.01
Smc3Q9CW03 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC15.1■□□□□ 0.01
Smc3Q9CW03 AC154262.2-202ENSMUST00000225158 1331 ntBASIC15.1■□□□□ 0.01
Smc3Q9CW03 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smc3Q9CW03 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Adra1a-206ENSMUST00000225182 2337 ntBASIC15.09■□□□□ 0.01
Smc3Q9CW03 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Gm18473-201ENSMUST00000220543 868 ntBASIC15.09■□□□□ 0.01
Smc3Q9CW03 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC15.09■□□□□ 0.01
Smc3Q9CW03 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Smc3Q9CW03 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Smc3Q9CW03 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smc3Q9CW03 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smc3Q9CW03 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smc3Q9CW03 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Smc3Q9CW03 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smc3Q9CW03 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC15.08■□□□□ 0.01
Smc3Q9CW03 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Smc3Q9CW03 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc3Q9CW03 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Smc3Q9CW03 Gm37391-201ENSMUST00000194891 2318 ntBASIC15.08■□□□□ 0
Smc3Q9CW03 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc3Q9CW03 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc3Q9CW03 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc3Q9CW03 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smc3Q9CW03 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.08■□□□□ 0
Smc3Q9CW03 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.08■□□□□ 0
Smc3Q9CW03 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc3Q9CW03 Gm44292-201ENSMUST00000205194 2364 ntBASIC15.08■□□□□ 0
Smc3Q9CW03 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Smc3Q9CW03 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc3Q9CW03 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc3Q9CW03 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.08■□□□□ 0
Smc3Q9CW03 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smc3Q9CW03 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC15.08■□□□□ 0
Smc3Q9CW03 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.08■□□□□ 0
Smc3Q9CW03 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc3Q9CW03 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc3Q9CW03 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc3Q9CW03 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smc3Q9CW03 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smc3Q9CW03 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 Gm13813-201ENSMUST00000120998 787 ntBASIC15.07■□□□□ 0
Smc3Q9CW03 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.07■□□□□ 0
Smc3Q9CW03 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Smc3Q9CW03 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.07■□□□□ 0
Smc3Q9CW03 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.07■□□□□ 0
Smc3Q9CW03 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 Gm2423-201ENSMUST00000074863 733 ntBASIC15.07■□□□□ 0
Smc3Q9CW03 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC15.07■□□□□ 0
Smc3Q9CW03 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms