Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm6916-202ENSMUST00000205523 195 ntBASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 AC164629.2-201ENSMUST00000217916 270 ntBASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Psmb5-202ENSMUST00000227257 622 ntBASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RTRAFQ9CQE8 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Gm24420-201ENSMUST00000176676 59 ntBASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Nrn1-204ENSMUST00000224323 1779 ntBASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RTRAFQ9CQE8 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms