Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.82□□□□□ -0.36
Trim33Q99PP7 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.82□□□□□ -0.36
Trim33Q99PP7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim33Q99PP7 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Gm11618-201ENSMUST00000117946 267 ntBASIC12.81□□□□□ -0.36
Trim33Q99PP7 Gm23958-201ENSMUST00000157207 105 ntBASIC12.81□□□□□ -0.36
Trim33Q99PP7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim33Q99PP7 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim33Q99PP7 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.81□□□□□ -0.36
Trim33Q99PP7 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim33Q99PP7 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Gm11978-201ENSMUST00000122315 466 ntBASIC12.8□□□□□ -0.36
Trim33Q99PP7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim33Q99PP7 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.8□□□□□ -0.36
Trim33Q99PP7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.8□□□□□ -0.36
Trim33Q99PP7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim33Q99PP7 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.79□□□□□ -0.36
Trim33Q99PP7 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Gm4984-201ENSMUST00000115987 360 ntBASIC12.79□□□□□ -0.36
Trim33Q99PP7 Gm12203-201ENSMUST00000118235 598 ntBASIC12.79□□□□□ -0.36
Trim33Q99PP7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Gm12209-201ENSMUST00000120089 596 ntBASIC12.79□□□□□ -0.36
Trim33Q99PP7 Gm27847-201ENSMUST00000183711 107 ntBASIC12.79□□□□□ -0.36
Trim33Q99PP7 Gm27375-201ENSMUST00000183799 107 ntBASIC12.79□□□□□ -0.36
Trim33Q99PP7 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.79□□□□□ -0.36
Trim33Q99PP7 Gm7561-201ENSMUST00000211203 886 ntBASIC12.79□□□□□ -0.36
Trim33Q99PP7 AC154634.3-201ENSMUST00000224589 736 ntBASIC12.79□□□□□ -0.36
Trim33Q99PP7 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.79□□□□□ -0.36
Trim33Q99PP7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Gm6091-201ENSMUST00000098307 165 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms