Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Gm11591-201ENSMUST00000120063 702 ntBASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Gm25261-201ENSMUST00000157416 134 ntBASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gtf2ird2Q99NI3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Gm42627-201ENSMUST00000197347 224 ntBASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Gm43133-201ENSMUST00000197472 463 ntBASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gtf2ird2Q99NI3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Gm14704-201ENSMUST00000120300 874 ntBASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Gm18584-201ENSMUST00000203098 964 ntBASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Gm32025-201ENSMUST00000217960 307 ntBASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Gm5781-201ENSMUST00000219792 443 ntBASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gtf2ird2Q99NI3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gtf2ird2Q99NI3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Gtf2ird2Q99NI3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gtf2ird2Q99NI3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Gtf2ird2Q99NI3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Gtf2ird2Q99NI3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms