Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
Nkd1Q99MH6 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkd1Q99MH6 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Gm44855-201ENSMUST00000205725 362 ntBASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Gm20949-201ENSMUST00000206478 952 ntBASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Cog3-203ENSMUST00000227473 4197 ntBASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkd1Q99MH6 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Gm12341-201ENSMUST00000119724 503 ntBASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.1□□□□□ -0.47
Nkd1Q99MH6 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkd1Q99MH6 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkd1Q99MH6 Gm16202-201ENSMUST00000117532 544 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms