Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.43□□□□□ -0.42
Vmp1Q99KU0 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Gm8602-201ENSMUST00000184045 607 ntBASIC12.43□□□□□ -0.42
Vmp1Q99KU0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.43□□□□□ -0.42
Vmp1Q99KU0 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Gm26315-201ENSMUST00000083890 321 ntBASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vmp1Q99KU0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Gm27486-201ENSMUST00000184923 80 ntBASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Gm38671-201ENSMUST00000200573 130 ntBASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vmp1Q99KU0 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms