Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.96□□□□□ -0.33
Cdk9Q99J95 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk9Q99J95 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk9Q99J95 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cdk9Q99J95 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk9Q99J95 Gm15240-201ENSMUST00000118156 720 ntBASIC12.96□□□□□ -0.33
Cdk9Q99J95 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.96□□□□□ -0.33
Cdk9Q99J95 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk9Q99J95 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk9Q99J95 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.96□□□□□ -0.33
Cdk9Q99J95 Gm3436-201ENSMUST00000179930 840 ntBASIC12.96□□□□□ -0.33
Cdk9Q99J95 Gm27680-201ENSMUST00000184192 160 ntBASIC12.96□□□□□ -0.33
Cdk9Q99J95 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cdk9Q99J95 Gm44344-201ENSMUST00000200287 129 ntBASIC12.96□□□□□ -0.33
Cdk9Q99J95 Gm44124-201ENSMUST00000204159 472 ntBASIC12.96□□□□□ -0.33
Cdk9Q99J95 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk9Q99J95 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk9Q99J95 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk9Q99J95 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk9Q99J95 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk9Q99J95 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk9Q99J95 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdk9Q99J95 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdk9Q99J95 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cdk9Q99J95 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdk9Q99J95 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdk9Q99J95 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdk9Q99J95 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Cdk9Q99J95 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
Cdk9Q99J95 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
Cdk9Q99J95 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdk9Q99J95 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.95□□□□□ -0.34
Cdk9Q99J95 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Gm27989-201ENSMUST00000184721 107 ntBASIC12.95□□□□□ -0.34
Cdk9Q99J95 Gm43703-201ENSMUST00000200523 763 ntBASIC12.95□□□□□ -0.34
Cdk9Q99J95 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.95□□□□□ -0.34
Cdk9Q99J95 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk9Q99J95 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk9Q99J95 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Gm12151-201ENSMUST00000121374 290 ntBASIC12.94□□□□□ -0.34
Cdk9Q99J95 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cdk9Q99J95 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Mir8102-201ENSMUST00000184148 139 ntBASIC12.94□□□□□ -0.34
Cdk9Q99J95 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.94□□□□□ -0.34
Cdk9Q99J95 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.94□□□□□ -0.34
Cdk9Q99J95 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms