Protein–RNA interactions for Protein: Q99J10

Ctu1, Cytoplasmic tRNA 2-thiolation protein 1, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctu1Q99J10 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctu1Q99J10 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.19□□□□□ -0.14
Ctu1Q99J10 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctu1Q99J10 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.19□□□□□ -0.14
Ctu1Q99J10 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctu1Q99J10 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctu1Q99J10 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctu1Q99J10 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ctu1Q99J10 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Gm12314-201ENSMUST00000118104 538 ntBASIC14.18□□□□□ -0.14
Ctu1Q99J10 Gm13813-201ENSMUST00000120998 787 ntBASIC14.18□□□□□ -0.14
Ctu1Q99J10 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Gm9550-201ENSMUST00000161130 862 ntBASIC14.18□□□□□ -0.14
Ctu1Q99J10 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.18□□□□□ -0.14
Ctu1Q99J10 Gm37835-201ENSMUST00000193305 361 ntBASIC14.18□□□□□ -0.14
Ctu1Q99J10 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ctu1Q99J10 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ctu1Q99J10 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Gm29615-201ENSMUST00000185371 697 ntBASIC14.17□□□□□ -0.14
Ctu1Q99J10 Gm28224-201ENSMUST00000186078 697 ntBASIC14.17□□□□□ -0.14
Ctu1Q99J10 Gm29001-201ENSMUST00000186177 697 ntBASIC14.17□□□□□ -0.14
Ctu1Q99J10 Gm28292-201ENSMUST00000186593 697 ntBASIC14.17□□□□□ -0.14
Ctu1Q99J10 Gm28101-201ENSMUST00000187608 697 ntBASIC14.17□□□□□ -0.14
Ctu1Q99J10 Gm29076-201ENSMUST00000187689 697 ntBASIC14.17□□□□□ -0.14
Ctu1Q99J10 Gm28302-201ENSMUST00000187931 697 ntBASIC14.17□□□□□ -0.14
Ctu1Q99J10 Gm28646-201ENSMUST00000188220 697 ntBASIC14.17□□□□□ -0.14
Ctu1Q99J10 Gm28205-201ENSMUST00000189177 697 ntBASIC14.17□□□□□ -0.14
Ctu1Q99J10 Gm29032-201ENSMUST00000189797 697 ntBASIC14.17□□□□□ -0.14
Ctu1Q99J10 Gm28695-201ENSMUST00000190300 697 ntBASIC14.17□□□□□ -0.14
Ctu1Q99J10 Gm37448-201ENSMUST00000192795 697 ntBASIC14.17□□□□□ -0.14
Ctu1Q99J10 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Gm42937-201ENSMUST00000197360 752 ntBASIC14.17□□□□□ -0.14
Ctu1Q99J10 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.17□□□□□ -0.14
Ctu1Q99J10 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.17□□□□□ -0.14
Ctu1Q99J10 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.17□□□□□ -0.14
Ctu1Q99J10 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctu1Q99J10 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctu1Q99J10 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ctu1Q99J10 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Ctu1Q99J10 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms