Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.14■□□□□ 0.01
Col20a1Q923P0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Gm18615-201ENSMUST00000222919 1031 ntBASIC15.14■□□□□ 0.01
Col20a1Q923P0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.14■□□□□ 0.01
Col20a1Q923P0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col20a1Q923P0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.13■□□□□ 0.01
Col20a1Q923P0 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Gm24830-201ENSMUST00000102024 166 ntBASIC15.13■□□□□ 0.01
Col20a1Q923P0 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Gm11930-201ENSMUST00000117788 190 ntBASIC15.13■□□□□ 0.01
Col20a1Q923P0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Gm15547-201ENSMUST00000122152 333 ntBASIC15.13■□□□□ 0.01
Col20a1Q923P0 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC15.13■□□□□ 0.01
Col20a1Q923P0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Gm25890-201ENSMUST00000177643 165 ntBASIC15.13■□□□□ 0.01
Col20a1Q923P0 Rnu1b2-201ENSMUST00000178073 165 ntBASIC15.13■□□□□ 0.01
Col20a1Q923P0 Rnu1b1-201ENSMUST00000178250 165 ntBASIC15.13■□□□□ 0.01
Col20a1Q923P0 Gm22614-201ENSMUST00000178300 165 ntBASIC15.13■□□□□ 0.01
Col20a1Q923P0 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Gm13097-201ENSMUST00000210722 397 ntBASIC15.13■□□□□ 0.01
Col20a1Q923P0 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.13■□□□□ 0.01
Col20a1Q923P0 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.13■□□□□ 0.01
Col20a1Q923P0 Gm22042-201ENSMUST00000082989 165 ntBASIC15.13■□□□□ 0.01
Col20a1Q923P0 Gm26232-201ENSMUST00000083360 166 ntBASIC15.13■□□□□ 0.01
Col20a1Q923P0 Gm24136-201ENSMUST00000083374 165 ntBASIC15.13■□□□□ 0.01
Col20a1Q923P0 Rnu1b6-201ENSMUST00000083839 166 ntBASIC15.13■□□□□ 0.01
Col20a1Q923P0 Gm26110-201ENSMUST00000083971 165 ntBASIC15.13■□□□□ 0.01
Col20a1Q923P0 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col20a1Q923P0 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Gm8862-201ENSMUST00000198379 1346 ntBASIC15.12■□□□□ 0.01
Col20a1Q923P0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC15.12■□□□□ 0.01
Col20a1Q923P0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms