Protein–RNA interactions for Protein: Q922Y2

Trim59, Tripartite motif-containing protein 59, mousemouse

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim59Q922Y2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.68□□□□□ -0.06
Trim59Q922Y2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim59Q922Y2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.68□□□□□ -0.06
Trim59Q922Y2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.68□□□□□ -0.06
Trim59Q922Y2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.68□□□□□ -0.06
Trim59Q922Y2 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trim59Q922Y2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim59Q922Y2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.67□□□□□ -0.06
Trim59Q922Y2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim59Q922Y2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.66□□□□□ -0.06
Trim59Q922Y2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Gm11478-201ENSMUST00000117851 599 ntBASIC14.66□□□□□ -0.06
Trim59Q922Y2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim59Q922Y2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim59Q922Y2 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim59Q922Y2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
Trim59Q922Y2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim59Q922Y2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
Trim59Q922Y2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim59Q922Y2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim59Q922Y2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim59Q922Y2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim59Q922Y2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim59Q922Y2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim59Q922Y2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim59Q922Y2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim59Q922Y2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms