Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm13123-201ENSMUST00000122173 492 ntBASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Gm6458-201ENSMUST00000211573 635 ntBASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdha3Q91Y16 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Gm16177-201ENSMUST00000120728 718 ntBASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdha3Q91Y16 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdha3Q91Y16 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdha3Q91Y16 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdha3Q91Y16 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Pcdha3Q91Y16 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdha3Q91Y16 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.46□□□□□ -0.26
Pcdha3Q91Y16 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.26
Pcdha3Q91Y16 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Gm26927-201ENSMUST00000182385 965 ntBASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Gm28693-202ENSMUST00000190758 331 ntBASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Gm10146-201ENSMUST00000072739 309 ntBASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.45□□□□□ -0.26
Pcdha3Q91Y16 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha3Q91Y16 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha3Q91Y16 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha3Q91Y16 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha3Q91Y16 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha3Q91Y16 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha3Q91Y16 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha3Q91Y16 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha3Q91Y16 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha3Q91Y16 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha3Q91Y16 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms