Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Gm11814-201ENSMUST00000119515 929 ntBASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 1700083H02Rik-201ENSMUST00000190526 637 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Gm37072-201ENSMUST00000194570 837 ntBASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Gm8952-201ENSMUST00000206828 1102 ntBASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Gm7972-201ENSMUST00000208434 1137 ntBASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Gm18473-201ENSMUST00000220543 868 ntBASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 AC192616.3-201ENSMUST00000220797 1124 ntBASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Itm2b-204ENSMUST00000228637 783 ntBASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Gm26315-201ENSMUST00000083890 321 ntBASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.93□□□□□ -0.34
Pcdhb20Q91XZ9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Gm4984-201ENSMUST00000115987 360 ntBASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Gm12584-201ENSMUST00000117109 1105 ntBASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Gm15824-201ENSMUST00000119516 955 ntBASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Gm15227-201ENSMUST00000121844 399 ntBASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Gm17150-201ENSMUST00000165577 381 ntBASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Gm26915-201ENSMUST00000183080 748 ntBASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 2610016A17Rik-203ENSMUST00000188711 515 ntTSL 2 BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Gm43815-201ENSMUST00000197676 990 ntBASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Gm18255-201ENSMUST00000211316 765 ntBASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 AC158631.2-201ENSMUST00000219999 478 ntBASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.92□□□□□ -0.34
Pcdhb20Q91XZ9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms