Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Gm25700-201ENSMUST00000177693 110 ntBASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Gm43138-201ENSMUST00000199123 708 ntBASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Gm9445-201ENSMUST00000207454 1285 ntBASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 AC123665.1-201ENSMUST00000228204 438 ntBASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb5Q91XZ5 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Gm43289-201ENSMUST00000200537 1475 ntBASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Gm4909-201ENSMUST00000118749 794 ntBASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Gm13813-201ENSMUST00000120998 787 ntBASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 AC154222.2-201ENSMUST00000225848 607 ntBASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Gm10312-201ENSMUST00000078515 489 ntBASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb5Q91XZ5 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Gm14999-201ENSMUST00000121039 624 ntBASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Gm3786-201ENSMUST00000202659 378 ntBASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Gm44262-201ENSMUST00000204969 372 ntBASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Gm44651-201ENSMUST00000207343 372 ntBASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Gm19208-201ENSMUST00000213861 912 ntBASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb5Q91XZ5 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms