Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Gm12291-201ENSMUST00000121627 311 ntBASIC13.29□□□□□ -0.28
Trim60Q8VI40 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.29□□□□□ -0.28
Trim60Q8VI40 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.29□□□□□ -0.28
Trim60Q8VI40 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Gm6218-201ENSMUST00000219812 628 ntBASIC13.29□□□□□ -0.28
Trim60Q8VI40 Gm18473-201ENSMUST00000220543 868 ntBASIC13.29□□□□□ -0.28
Trim60Q8VI40 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.29□□□□□ -0.28
Trim60Q8VI40 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.29□□□□□ -0.28
Trim60Q8VI40 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim60Q8VI40 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.28□□□□□ -0.28
Trim60Q8VI40 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.28□□□□□ -0.28
Trim60Q8VI40 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim60Q8VI40 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim60Q8VI40 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim60Q8VI40 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim60Q8VI40 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.27□□□□□ -0.28
Trim60Q8VI40 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim60Q8VI40 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim60Q8VI40 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim60Q8VI40 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim60Q8VI40 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim60Q8VI40 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim60Q8VI40 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim60Q8VI40 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim60Q8VI40 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim60Q8VI40 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim60Q8VI40 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim60Q8VI40 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Trim60Q8VI40 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Trim60Q8VI40 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim60Q8VI40 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms