Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Gm27306-201ENSMUST00000183970 107 ntBASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Gm27989-201ENSMUST00000184721 107 ntBASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh18Q8VHR0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.42□□□□□ -0.42
Pcdh18Q8VHR0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Gm9522-201ENSMUST00000182394 926 ntBASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.41□□□□□ -0.42
Pcdh18Q8VHR0 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms