Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q8VDP2 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q8VDP2 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q8VDP2 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Q8VDP2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q8VDP2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Q8VDP2 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Q8VDP2 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q8VDP2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q8VDP2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q8VDP2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q8VDP2 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q8VDP2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.51□□□□□ -0.41
Q8VDP2 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.51□□□□□ -0.41
Q8VDP2 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.51□□□□□ -0.41
Q8VDP2 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
Q8VDP2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Q8VDP2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Q8VDP2 Gm19165-201ENSMUST00000204453 1982 ntBASIC12.51□□□□□ -0.41
Q8VDP2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Q8VDP2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.51□□□□□ -0.41
Q8VDP2 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Q8VDP2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Q8VDP2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.51□□□□□ -0.41
Q8VDP2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Gm13464-201ENSMUST00000119418 935 ntBASIC12.51□□□□□ -0.41
Q8VDP2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.51□□□□□ -0.41
Q8VDP2 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Q8VDP2 Gm4899-201ENSMUST00000178708 719 ntBASIC12.51□□□□□ -0.41
Q8VDP2 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.51□□□□□ -0.41
Q8VDP2 Gm27300-201ENSMUST00000184085 97 ntBASIC12.51□□□□□ -0.41
Q8VDP2 Gm27335-201ENSMUST00000184758 97 ntBASIC12.51□□□□□ -0.41
Q8VDP2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.51□□□□□ -0.41
Q8VDP2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.51□□□□□ -0.41
Q8VDP2 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.51□□□□□ -0.41
Q8VDP2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Q8VDP2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Gm10175-201ENSMUST00000086013 645 ntBASIC12.51□□□□□ -0.41
Q8VDP2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.51□□□□□ -0.41
Q8VDP2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.51□□□□□ -0.41
Q8VDP2 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.51□□□□□ -0.41
Q8VDP2 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.51□□□□□ -0.41
Q8VDP2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Q8VDP2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.51□□□□□ -0.41
Q8VDP2 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Q8VDP2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.51□□□□□ -0.41
Q8VDP2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Q8VDP2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Q8VDP2 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q8VDP2 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.5□□□□□ -0.41
Q8VDP2 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q8VDP2 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q8VDP2 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q8VDP2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q8VDP2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q8VDP2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q8VDP2 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q8VDP2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q8VDP2 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q8VDP2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Q8VDP2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Q8VDP2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.5□□□□□ -0.41
Q8VDP2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Q8VDP2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.5□□□□□ -0.41
Q8VDP2 Olfr286-202ENSMUST00000205305 969 ntBASIC12.5□□□□□ -0.41
Q8VDP2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.5□□□□□ -0.41
Q8VDP2 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.5□□□□□ -0.41
Q8VDP2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.5□□□□□ -0.41
Q8VDP2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Q8VDP2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Q8VDP2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q8VDP2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Q8VDP2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms