Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpap2Q8VC34 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpap2Q8VC34 Snora73a-201ENSMUST00000082453 205 ntBASIC14.1□□□□□ -0.15
Rpap2Q8VC34 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rpap2Q8VC34 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpap2Q8VC34 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rpap2Q8VC34 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpap2Q8VC34 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpap2Q8VC34 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.1□□□□□ -0.15
Rpap2Q8VC34 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpap2Q8VC34 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Rpap2Q8VC34 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.1□□□□□ -0.15
Rpap2Q8VC34 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpap2Q8VC34 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rpap2Q8VC34 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpap2Q8VC34 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpap2Q8VC34 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpap2Q8VC34 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpap2Q8VC34 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rpap2Q8VC34 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rpap2Q8VC34 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rpap2Q8VC34 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Mir1982-201ENSMUST00000157368 74 ntBASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpap2Q8VC34 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms