Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Gm11618-201ENSMUST00000117946 267 ntBASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Gm28693-202ENSMUST00000190758 331 ntBASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Gm8515-201ENSMUST00000194852 576 ntBASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Gm8463-201ENSMUST00000208573 613 ntBASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps39Q8R5L3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms