Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nudcd3Q8R1N4 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Gm5279-201ENSMUST00000199575 745 ntBASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Gm26315-201ENSMUST00000083890 321 ntBASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nudcd3Q8R1N4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nudcd3Q8R1N4 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Nudcd3Q8R1N4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.83□□□□□ -0.35
Nudcd3Q8R1N4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nudcd3Q8R1N4 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Gm13223-201ENSMUST00000118609 747 ntBASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nudcd3Q8R1N4 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 394.5 ms