Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Mir7677-201ENSMUST00000184226 67 ntBASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Gm6905-201ENSMUST00000205729 511 ntBASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Gm17827-201ENSMUST00000211825 742 ntBASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ddx54Q8K4L0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Ddx54Q8K4L0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ddx54Q8K4L0 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.26
Ddx54Q8K4L0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ddx54Q8K4L0 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Gm14921-201ENSMUST00000118643 908 ntBASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Mir1901-201ENSMUST00000122616 78 ntBASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Mir6998-201ENSMUST00000183343 64 ntBASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 AC153505.1-201ENSMUST00000218819 1071 ntBASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 AC154290.1-201ENSMUST00000223786 1240 ntBASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 AC163667.3-201ENSMUST00000225774 222 ntBASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx54Q8K4L0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 AC123619.2-202ENSMUST00000225097 1568 ntBASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Gm10774-201ENSMUST00000188689 204 ntBASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Gm270-201ENSMUST00000223010 976 ntBASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ddx54Q8K4L0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC16.68■□□□□ 0.26
Ddx54Q8K4L0 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms