Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Gm14921-201ENSMUST00000118643 908 ntBASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cchcr1Q8K2I2 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Gm10156-201ENSMUST00000122364 462 ntBASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cchcr1Q8K2I2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Gm12091-201ENSMUST00000146791 830 ntBASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Gm37922-201ENSMUST00000195596 455 ntBASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Gm8598-201ENSMUST00000221184 836 ntBASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cchcr1Q8K2I2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms