Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm2231-201ENSMUST00000125661 612 ntBASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Gm8805-201ENSMUST00000117848 313 ntBASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Gm11637-201ENSMUST00000120601 592 ntBASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Gm16177-201ENSMUST00000120728 718 ntBASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rfwd3Q8CIK8 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Gm43818-201ENSMUST00000200605 466 ntBASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Gm6458-201ENSMUST00000211573 635 ntBASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfwd3Q8CIK8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms