Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Gm27572-201ENSMUST00000183702 255 ntBASIC13.14□□□□□ -0.31
CopaQ8CIE6 Gm27682-201ENSMUST00000183930 110 ntBASIC13.14□□□□□ -0.31
CopaQ8CIE6 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.14□□□□□ -0.31
CopaQ8CIE6 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CopaQ8CIE6 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.14□□□□□ -0.31
CopaQ8CIE6 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.14□□□□□ -0.31
CopaQ8CIE6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CopaQ8CIE6 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Gm1335-201ENSMUST00000121653 386 ntBASIC13.13□□□□□ -0.31
CopaQ8CIE6 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.13□□□□□ -0.31
CopaQ8CIE6 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.13□□□□□ -0.31
CopaQ8CIE6 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.13□□□□□ -0.31
CopaQ8CIE6 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CopaQ8CIE6 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.12□□□□□ -0.31
CopaQ8CIE6 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.12□□□□□ -0.31
CopaQ8CIE6 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Gm13369-201ENSMUST00000119442 987 ntBASIC13.12□□□□□ -0.31
CopaQ8CIE6 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CopaQ8CIE6 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.12□□□□□ -0.31
CopaQ8CIE6 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CopaQ8CIE6 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms