Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Gm13813-201ENSMUST00000120998 787 ntBASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Gm12291-201ENSMUST00000121627 311 ntBASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Proscos-202ENSMUST00000178990 666 ntBASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Gm6180-201ENSMUST00000065243 498 ntBASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc38Q8CDN8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Gm11618-201ENSMUST00000117946 267 ntBASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Gm10156-201ENSMUST00000122364 462 ntBASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc38Q8CDN8 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc38Q8CDN8 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms