Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Uba3Q8C878 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.53□□□□□ -0.24
Uba3Q8C878 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Uba3Q8C878 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Uba3Q8C878 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Uba3Q8C878 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Uba3Q8C878 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
Uba3Q8C878 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Uba3Q8C878 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Uba3Q8C878 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Uba3Q8C878 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Uba3Q8C878 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Uba3Q8C878 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Uba3Q8C878 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Uba3Q8C878 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.52□□□□□ -0.25
Uba3Q8C878 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Uba3Q8C878 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.52□□□□□ -0.25
Uba3Q8C878 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Uba3Q8C878 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Uba3Q8C878 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Uba3Q8C878 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Uba3Q8C878 Snora73a-201ENSMUST00000082453 205 ntBASIC13.52□□□□□ -0.25
Uba3Q8C878 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.52□□□□□ -0.25
Uba3Q8C878 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.52□□□□□ -0.25
Uba3Q8C878 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Uba3Q8C878 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Uba3Q8C878 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Uba3Q8C878 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Uba3Q8C878 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Uba3Q8C878 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.52□□□□□ -0.25
Uba3Q8C878 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Uba3Q8C878 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Uba3Q8C878 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Uba3Q8C878 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Uba3Q8C878 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Uba3Q8C878 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Uba3Q8C878 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.51□□□□□ -0.25
Uba3Q8C878 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.51□□□□□ -0.25
Uba3Q8C878 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.51□□□□□ -0.25
Uba3Q8C878 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Uba3Q8C878 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.51□□□□□ -0.25
Uba3Q8C878 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Uba3Q8C878 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.51□□□□□ -0.25
Uba3Q8C878 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Uba3Q8C878 Gm12957-201ENSMUST00000117835 377 ntBASIC13.51□□□□□ -0.25
Uba3Q8C878 Gm11591-201ENSMUST00000120063 702 ntBASIC13.51□□□□□ -0.25
Uba3Q8C878 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.51□□□□□ -0.25
Uba3Q8C878 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
Uba3Q8C878 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Snora78-201ENSMUST00000158630 128 ntBASIC13.51□□□□□ -0.25
Uba3Q8C878 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Uba3Q8C878 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.51□□□□□ -0.25
Uba3Q8C878 AY702102-202ENSMUST00000194651 1173 ntBASIC13.51□□□□□ -0.25
Uba3Q8C878 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.51□□□□□ -0.25
Uba3Q8C878 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Uba3Q8C878 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Uba3Q8C878 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.51□□□□□ -0.25
Uba3Q8C878 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.51□□□□□ -0.25
Uba3Q8C878 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Uba3Q8C878 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Uba3Q8C878 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba3Q8C878 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Uba3Q8C878 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba3Q8C878 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.5□□□□□ -0.25
Uba3Q8C878 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba3Q8C878 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba3Q8C878 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Uba3Q8C878 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba3Q8C878 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Uba3Q8C878 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms