Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.38■□□□□ 0.21
Ccdc60Q8C4J0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc60Q8C4J0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc60Q8C4J0 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ccdc60Q8C4J0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ccdc60Q8C4J0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc60Q8C4J0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc60Q8C4J0 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc60Q8C4J0 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc60Q8C4J0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC16.38■□□□□ 0.21
Ccdc60Q8C4J0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc60Q8C4J0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc60Q8C4J0 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ccdc60Q8C4J0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc60Q8C4J0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Gm12957-201ENSMUST00000117835 377 ntBASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Gm7809-201ENSMUST00000153199 742 ntBASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Gm37424-201ENSMUST00000191727 561 ntBASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 n-R5s195-201ENSMUST00000082891 119 ntBASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Gm43045-201ENSMUST00000198725 2095 ntBASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
Ccdc60Q8C4J0 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Gm22018-201ENSMUST00000104357 131 ntBASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc60Q8C4J0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Gm5187-201ENSMUST00000117317 991 ntBASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC16.35■□□□□ 0.21
Ccdc60Q8C4J0 Gm8062-201ENSMUST00000139696 444 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms