Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Paupar-201ENSMUST00000194826 3482 ntBASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf3Q8C120 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Gm24644-201ENSMUST00000157114 139 ntBASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Gm29705-201ENSMUST00000212598 474 ntBASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh3rf3Q8C120 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Gm5745-201ENSMUST00000183748 313 ntBASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh3rf3Q8C120 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf3Q8C120 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms