Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC14.2□□□□□ -0.14
Trim35Q8C006 Gm42625-201ENSMUST00000198611 922 ntBASIC14.2□□□□□ -0.14
Trim35Q8C006 Gm18049-201ENSMUST00000208909 581 ntBASIC14.2□□□□□ -0.14
Trim35Q8C006 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim35Q8C006 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim35Q8C006 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim35Q8C006 Gm18591-201ENSMUST00000220568 763 ntBASIC14.2□□□□□ -0.14
Trim35Q8C006 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim35Q8C006 Gm9788-201ENSMUST00000057038 906 ntBASIC14.2□□□□□ -0.14
Trim35Q8C006 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Gm26203-201ENSMUST00000082911 114 ntBASIC14.2□□□□□ -0.14
Trim35Q8C006 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim35Q8C006 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim35Q8C006 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.2□□□□□ -0.14
Trim35Q8C006 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim35Q8C006 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Trim35Q8C006 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim35Q8C006 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim35Q8C006 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Trim35Q8C006 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim35Q8C006 Gm16211-201ENSMUST00000147722 1620 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim35Q8C006 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim35Q8C006 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.19□□□□□ -0.14
Trim35Q8C006 Gm2788-206ENSMUST00000210463 1338 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim35Q8C006 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim35Q8C006 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Trim35Q8C006 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trim35Q8C006 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim35Q8C006 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim35Q8C006 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.19□□□□□ -0.14
Trim35Q8C006 Gm5479-201ENSMUST00000160578 435 ntBASIC14.19□□□□□ -0.14
Trim35Q8C006 AA543401-201ENSMUST00000164248 1269 ntBASIC14.19□□□□□ -0.14
Trim35Q8C006 Gm9027-201ENSMUST00000165914 661 ntBASIC14.19□□□□□ -0.14
Trim35Q8C006 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim35Q8C006 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Gm29240-201ENSMUST00000187248 286 ntBASIC14.19□□□□□ -0.14
Trim35Q8C006 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC14.19□□□□□ -0.14
Trim35Q8C006 Gm43040-201ENSMUST00000202399 558 ntBASIC14.19□□□□□ -0.14
Trim35Q8C006 Gm18452-201ENSMUST00000202968 1111 ntBASIC14.19□□□□□ -0.14
Trim35Q8C006 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC14.19□□□□□ -0.14
Trim35Q8C006 Gm43954-201ENSMUST00000204634 544 ntBASIC14.19□□□□□ -0.14
Trim35Q8C006 Flt3l-210ENSMUST00000211246 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Gm32856-202ENSMUST00000212180 1134 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 AC166902.3-201ENSMUST00000216696 991 ntTSL 3 BASIC14.19□□□□□ -0.14
Trim35Q8C006 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC14.19□□□□□ -0.14
Trim35Q8C006 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trim35Q8C006 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.19□□□□□ -0.14
Trim35Q8C006 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim35Q8C006 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
Trim35Q8C006 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.19□□□□□ -0.14
Trim35Q8C006 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim35Q8C006 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim35Q8C006 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim35Q8C006 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim35Q8C006 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim35Q8C006 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim35Q8C006 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim35Q8C006 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim35Q8C006 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim35Q8C006 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim35Q8C006 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim35Q8C006 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.18□□□□□ -0.14
Trim35Q8C006 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim35Q8C006 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim35Q8C006 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim35Q8C006 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim35Q8C006 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim35Q8C006 Gm13015-201ENSMUST00000118674 204 ntBASIC14.18□□□□□ -0.14
Trim35Q8C006 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms