Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Gm15703-201ENSMUST00000120250 880 ntBASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Gm8856-201ENSMUST00000185254 1144 ntBASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Gm43068-201ENSMUST00000201095 1273 ntBASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Gm45224-201ENSMUST00000208203 414 ntBASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp40Q8BWR4 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Grk6-205ENSMUST00000224653 2976 ntBASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 AC123665.1-201ENSMUST00000228204 438 ntBASIC17.55■□□□□ 0.4
Usp40Q8BWR4 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Gm43908-201ENSMUST00000205074 1472 ntBASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Gm45495-201ENSMUST00000200940 1700 ntBASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp40Q8BWR4 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Gm12314-201ENSMUST00000118104 538 ntBASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Gm45691-201ENSMUST00000206905 1120 ntBASIC17.54■□□□□ 0.4
Usp40Q8BWR4 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Gm10312-201ENSMUST00000078515 489 ntBASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp40Q8BWR4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp40Q8BWR4 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp40Q8BWR4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Usp40Q8BWR4 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Usp40Q8BWR4 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp40Q8BWR4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp40Q8BWR4 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp40Q8BWR4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC17.53■□□□□ 0.4
Usp40Q8BWR4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC17.53■□□□□ 0.4
Usp40Q8BWR4 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp40Q8BWR4 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp40Q8BWR4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp40Q8BWR4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Usp40Q8BWR4 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms