Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nucks1Q80XU3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nucks1Q80XU3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nucks1Q80XU3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nucks1Q80XU3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.73□□□□□ -0.21
Nucks1Q80XU3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nucks1Q80XU3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nucks1Q80XU3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nucks1Q80XU3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nucks1Q80XU3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Gm12091-201ENSMUST00000146791 830 ntBASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.72□□□□□ -0.21
Nucks1Q80XU3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nucks1Q80XU3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Gm13612-201ENSMUST00000119276 390 ntBASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Gm13813-201ENSMUST00000120998 787 ntBASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Gm12291-201ENSMUST00000121627 311 ntBASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Gm8515-201ENSMUST00000194852 576 ntBASIC13.71□□□□□ -0.21
Nucks1Q80XU3 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.71□□□□□ -0.21
Nucks1Q80XU3 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.71□□□□□ -0.21
Nucks1Q80XU3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Nucks1Q80XU3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Nucks1Q80XU3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nucks1Q80XU3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nucks1Q80XU3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.71□□□□□ -0.22
Nucks1Q80XU3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nucks1Q80XU3 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Nucks1Q80XU3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Nucks1Q80XU3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nucks1Q80XU3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.7□□□□□ -0.22
Nucks1Q80XU3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nucks1Q80XU3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nucks1Q80XU3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nucks1Q80XU3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nucks1Q80XU3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.7□□□□□ -0.22
Nucks1Q80XU3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nucks1Q80XU3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nucks1Q80XU3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nucks1Q80XU3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nucks1Q80XU3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nucks1Q80XU3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nucks1Q80XU3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nucks1Q80XU3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nucks1Q80XU3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms