Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trim62Q80V85 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim62Q80V85 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trim62Q80V85 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim62Q80V85 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Trim62Q80V85 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim62Q80V85 Gm25261-201ENSMUST00000157416 134 ntBASIC13.29□□□□□ -0.28
Trim62Q80V85 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim62Q80V85 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.29□□□□□ -0.28
Trim62Q80V85 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim62Q80V85 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Gm3890-201ENSMUST00000182416 207 ntBASIC13.29□□□□□ -0.28
Trim62Q80V85 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.29□□□□□ -0.28
Trim62Q80V85 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim62Q80V85 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.29□□□□□ -0.28
Trim62Q80V85 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.29□□□□□ -0.28
Trim62Q80V85 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Gm10478-201ENSMUST00000084451 396 ntBASIC13.29□□□□□ -0.28
Trim62Q80V85 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim62Q80V85 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim62Q80V85 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim62Q80V85 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.28□□□□□ -0.28
Trim62Q80V85 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.28□□□□□ -0.28
Trim62Q80V85 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim62Q80V85 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim62Q80V85 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Trim62Q80V85 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim62Q80V85 Gm38002-201ENSMUST00000193255 180 ntBASIC13.28□□□□□ -0.28
Trim62Q80V85 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.28□□□□□ -0.28
Trim62Q80V85 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.28□□□□□ -0.28
Trim62Q80V85 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim62Q80V85 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim62Q80V85 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim62Q80V85 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim62Q80V85 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim62Q80V85 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.28□□□□□ -0.28
Trim62Q80V85 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim62Q80V85 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.28□□□□□ -0.28
Trim62Q80V85 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim62Q80V85 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim62Q80V85 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim62Q80V85 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trim62Q80V85 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim62Q80V85 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.27□□□□□ -0.28
Trim62Q80V85 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim62Q80V85 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim62Q80V85 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trim62Q80V85 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms