Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Gm13226-201ENSMUST00000117838 404 ntBASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Gm14660-201ENSMUST00000119809 575 ntBASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpp38Q80UU2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Gm15824-201ENSMUST00000119516 955 ntBASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Gm11591-201ENSMUST00000120063 702 ntBASIC12.82□□□□□ -0.36
Rpp38Q80UU2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Gm26035-201ENSMUST00000083065 308 ntBASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rpp38Q80UU2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpp38Q80UU2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Gm25261-201ENSMUST00000157416 134 ntBASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpp38Q80UU2 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms